The Ensembl project is both a source of genome sequence related data (http://www.ensembl.org) and an open source software system that can be used to organise any such data.
Some projects make use of the Ensembl software system, or are derived from it.
|Vega||Website to present curated vertebrate annotation||Web front-end derived from Ensembl webcode;
Ensembl database and Perl API
|VectorBase||Bioinformatic Resource Centre for Invertebrate Vectors of Human Pathogens||Customised Ensembl webcode, Ensembl Compara pipeline, Ensembl annotation pipeline|
|DeCIFR legume project||Automated annotation and display of legume genomes||Customised Ensembl pipeline, API, and webcode|
|AtEnsembl||Arabidopsis thaliana genome browser||Customised Ensembl pipeline, API, and webcode|
|Otter||Database backend for interactive curation of annotation||Otter is an extension of the Ensembl database schema|
|Gramene||A Comparative Mapping Resource for Grains||Customised webcode, Ensembl Compara pipeline, Ensembl database used for annotation, import of the Arabidopsis Ensembl database from NASC.|
|CADRE||Central Aspergillus Data REpository|
|Sigenae||Sigenae EST ContigBrowser|
|COSMIC (Catalogue of Somatic Mutations in Cancer)||Web display of somatic sequence variant/mutation data||Customised Ensembl drawing code|
|MVP (Methylation Variable Positions)||Web display of MVPs analysed in the Human Epigenome Project.||Customised Ensembl drawing code|
|S. pombe Gene Expression Viewer||Web display of S. pombe gene expression under various environmental conditions.||Customised Ensembl drawing code|
|PupaSuite||Interactive web tool for the selection of optimal sets of SNP for genotyping purposes, with prediction of functional effect and visualisation facilities.||Web front end to a CGI that uses APIs.|
|ISACGH||Web tool to detect chromosomal copy number alterations and relate them to gene expression and gene function.||Web front end to a CGI that uses APIs. DAS server.|
|Phylopat||Web tool to show the presence or absence of certain genes or proteins in a set of eukaryote species.||Uses orthologue data extracted from EnsMart.|
|Chromhome||A database of chromosome map data, particularly chromosome painting data between species.||Ensembl karyotype drawing code.|
If you are using Ensembl code in your project, you might like to download the 'empowered' logo (high-resolution PNG, suitable for use in print).